epivizrData Usage7 years ago
Usage
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Introduction to epivizr: interactive visualization for genomic data7 years ago
Preliminaries: the data | Using epivizr | The epivizr app | Listing available chart types | Adding charts | Adding block region tracks | Modifying chart settings and colors | Printing charts | Adding line plots along the genome | Managing the app | Charts that are not aligned to genomic location | Adding a scatterplot | The RangedSummarizedExperiment Object | Visualizing data available from epiviz webserver | Load remote measurements | Query measurements and add charts | More application interactions | Slideshow | Printing the epivizr workspace | Saving the epivizr workspace | Restarting the epivizr workspace | Closing the session | Standalone version and browsing arbitrary genomes | SessionInfo
Wrench8 years ago
Abstract | Introduction | Installation | Running Wrench | Usage with differential abundance pipelines | Some caveats / work in development | The "detrend" option | Session Info
Visualizing Files with epivizrChart8 years ago
Visualizing genomic data in Shiny Apps using epivizrChart8 years ago
Visualizing Epiviz Web Components with epivizrChart8 years ago
What are Epiviz Web Components ? | Epiviz Charts | Epiviz Environment | Epiviz Navigation | epivizrChart examples | Navigate the Genome | Epiviz Navigation Element | Remove Charts | Create Charts with Settings and Colors | Using Interactive Mode | Visualizing data from data.frame
Visualizing RangeSummarizedExperiment objects Shiny Apps using epivizrChart8 years ago
Introduction to epivizrStandalone9 years ago
Launch Epiviz Desktop App
epivizrServer Usage10 years ago
Usage
Introduction to antiProfiles14 years ago